Results
| Type | Sequencea | Binding pocketb |
|---|---|---|
| NUC | MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDGEVEREEKLR | pocket 1: Y11 K12 M13 S45 R81 R82 P107 F110 K111 Y112 R113 G114 A115 S147 A175 |
| ATP | MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDGEVEREEKLR | pocket 1: K9 Y11 I18 A20 G38 P39 S40 G41 S42 G43 K44 S45 T46 H204 D220 G221 pocket 2: Q90 S147 G148 G149 Q150 D170 Q171 G174 A175 L176 D177 D205 |
Note:
a Binding residues are highlighted in red color;
b Binding residues are displayed in "Residue + Residue sequence number in PDB file" format.
For ligands belonging to 1159 ligands, predicted binding residues are clustered into binding pockets using mean shift spatial clustering algorithm.
3D view for NUC-binding protein
3D view for ATP-binding protein