Results
| Type | Sequencea | Binding pocketsa,b |
|---|---|---|
| ATP | MIKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDGEVEREEKLR | pocket 1: Y11 I18 A20 G38 P39 S40 G41 S42 G43 K44 S45 T46 Q90 H204 pocket 2: F138 H141 Q145 S147 G148 G149 Q150 Q151 R153 A175 |
Note:
a For Ca2+, Mn2+, Mg2+, ATP and HEME, high confidence binding residues (the mean of predicted binding scores of GraphBind and DELIA) are highlighted in red color;
medium confidence binding residues (predicted by either GraphBind or DELIA) are highlighted in blue color.
For DNA, RNA and general ligands, binding residues are highlighted in red color.
b Binding residues are displayed in "Residue + Residue sequence number in PDB file" format.
Predicted binding residues are clustered into binding pockets using mean shift spatial clustering algorithm.
3D view for ATP-binding protein