RNA-binding proteins (RBPs) are involved in many biological processes, their binding sites on RNAs can give insights into mechanisms behind diseases involving RBPs.

Step 1 : Choose a species: help

Human Fly Zebrafish

Mouse Worm

Arabidopsis Yeast

Step 2 : Choose your RNA type: help

Linear RNA

Circular RNA

Step 3 : Choose a model: help

All models

Specific model   


AARS
CSTF2T
EIF3G
GNL3
ILF3
NONO
PUS1
SF3B1
TARDBP
XPO5
AATF
DDX21
EIF3H
GPKOW
KHDRBS1
NPM1
QKI
SF3B4
TBRG4
XRCC6
ABCF1
DDX24
EIF4G2
GRSF1
KHSRP
NSUN2
RBFOX2
SFPQ
TIA1
XRN2
AGGF1
DDX3X
EWSR1
GRWD1
LARP4
PABPC4
RBM15
SLBP
TIAL1
YBX3
AKAP1
DDX42
EXOSC5
GTF2F1
LARP7
PABPN1
RBM22
SLTM
TNRC6A
YWHAG
AKAP8L
DDX51
FAM120A
HLTF
LIN28B
PCBP1
RBM27
SMNDC1
TRA2A
ZC3H11A
APOBEC3C
DDX52
FASTKD2
HNRNPA1
LSM11
PCBP2
RBM5
SND1
TROVE2
ZC3H8
AQR
DDX55
FKBP4
HNRNPC
MATR3
PHF6
RPS11
SRSF1
U2AF1
ZNF622
AUH
DDX59
FMR1
HNRNPK
METAP2
POLR2G
RPS3
SRSF7
U2AF2
ZNF800
BCCIP
DDX6
FTO
HNRNPL
MTPAP
PPIG
RPS5
SRSF9
UCHL5
ZRANB2
BCLAF1
DGCR8
FUBP3
HNRNPM
NCBP2
PPIL4
SAFB2
SSB
UPF1
BUD13
DHX30
FUS
HNRNPUL1
NIP7
PRPF4
SAFB
STAU2
UTP18
CDC40
DKC1
FXR1
HNRNPU
NIPBL
PRPF8
SBDS
SUB1
UTP3
CPEB4
DROSHA
FXR2
IGF2BP1
NKRF
PTBP1
SDAD1
SUGP2
WDR3
CPSF6
EFTUD2
G3BP1
IGF2BP2
NOL12
PUM1
SERBP1
SUPV3L1
WDR43
CSTF2
EIF3D
GEMIN5
IGF2BP3
NOLC1
PUM2
SF3A3
TAF15
WRN
ACI
CELF2
CPSF7
ELAVL1
HNRNPH1
MKRN1
PRKRA
SDOS
TDP43
YTHDC1
AGO2
CHTOP
DDX3
EZH2
HNRNPH
MOV10
RBFOX1
SMN
TNRC6B
YTHDC2
ALKBH1
CNBP
DICER1
FBL
IMP3
NCBP3
RBM10
SRRM4
TNRC6C
YTHDF1
ALKBH5
CPSF1
DIS3L2
FIP1L1
LIN28A
NOP56
RBM15B
SRSF10
U2AF65
YTHDF2
ALYREF
CPSF2
EIF3A
HNRNPA2B1
MBNL2
NOP58
RBM47
SRSF3
UNR
YTHDF3
ATXN2
CPSF3
EIF3B
HNRNPD
METTL14
NUDT21
RBPMS
STAU1
WDR33
ZC3H7B
CAPRIN1
CPSF4
EIF4A3
HNRNPF
METTL3
NXF1
RTCB
TARBP2
WTAP

General model for unseen protein help


Step 4 : Input RNA sequence: (Example) help


Or you can upload your sequence file (in fasta format):

Step 5 : Email address (optional):