Benchmark Data
Shi-Hao Feng, Jing Yang, Yang Yang, and Hong-Bin Shen, Submittted, 2019.
Click here to download the test set consisting of 40 transmembrane proteins.
Jing Yang and Hong-Bin Shen, Bioinformatics, 2018, 34: 230-238.
Click here to download the independent dataset consisting of 175 transmembrane proteins.
Jing Yang et al., Bioinformatics, 2013, 29: 2579-2587.
Click here to download the training dataset for inter-TMH residue contact prediction (60 TMPs).
Click here to download the independent dataset for inter-TMH residue contact prediction (21 TMPs).
Click here to download the 4-fold cross-validation subsets for inter-TMH residue contact prediction.
Feng Xiao and Hong-Bin Shen, J. Chem. Inf. Model., 2015, 55: 2464-2474.
Click here to download the datasets of FASTA format for training MemBrain-rASA.
Hong-Bin Shen and James J. Chou, PLoS ONE, 2008, 6: e2399.
Click here to download the supporting information for TMH prediction.