- Hehe Wu, Yi Fang, Yang Yang, Xiaoyong Pan and Hong-Bin Shen
Decoding protein binding landscape on circular RNAs with base-resolution Transformer models.
In submission.
- Kaiming Zhang, Xiaoyong Pan, Yang Yang, and Hong-Bin Shen
CRIP: predicting circRNA-RBP interaction sites using a codon-based encoding and hybrid deep neural networks.
RNA, 2019, 25(12):1604-1615. [View article]
- Xiaoyong Pan, Peter Rijnbeek, Junchi Yan and Hong-Bin Shen
Prediction of RNA-protein sequence and structure binding preferences using deep convolutional and recurrent neural networks.
BMC Genomics, 2018, 19: 511. [View article]
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